YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110807041, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKIKNPALL VEALVRGNSA RNRLIMYEAL LVVFLIVAIG LVGLIMLQQG KGADMGASFG  60
   61 AGASATLFGS SGSGNFMTRM TALLATLFFI ISLVLGNINS NKTNRGSEWE NLSAPAKTEQ 120
  121 TQPAAPAKPT SDIPN

Type	Start	End	Confidence
Cytoplasmic	1	23	0.94
Transmembrane Helix	24	47	0.89
Non-Cytoplasmic	48	75	0.73
Transmembrane Helix	76	98	0.84
Cytoplasmic	99	135	0.79