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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110616564, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKKNITGYI MVPSTFSRLK AARCLPVVLA ALIFAGCGTH TPDQSTAYMQ GTAQADSAFY  60
   61 LQQMQQSSDD TRINWQLLAI RALVKEGKTG QAVELFNQLP QELNDSQRRE KTLLAAEIKL 120
  121 AQKDFAGAQN LLAKITPADL EQNQQARYWQ AKIDASQGRP SIDLLRALIA QEPLLGAKEK 180
  181 QQNIDATWQA LSSMTQEQAN TLVINADENI LQGWLDLQRV WFDNRNDPDM MKAGIADWQK 240
  241 RYPNNPGAKM LPTQLVNVKA FKPASTNKIA LLLPLNGQAA VFGRTIQQGF EAAKNIGTQP 300
  301 VAAQVAAAPA ADVAEQPQPQ TADGVASPAQ ASVSDLTGDQ PAAQPVPVSA PATSTAAVSA 360
  361 PANPSAELKI YDTSSQPLSQ ILSQVQQDGA SIVVGPLLKN NVEELLKSNT PLNVLALNQP 420
  421 ENIENRVNIC YFALSPEDEA RDAARHIRDQ GKQAPLVLIP RSALGDRVAN AFAQEWQKLG 480
  481 GGTVLQQKFG STSELRAGVN GGSGIALTGS PITPRATTDS GMTTNNPTLQ TTPTDDQFTN 540
  541 NGGRVDAVYI VATPGEIAFI KPMIAMRNGS QSGATLYASS RSAQGTAGPD FRLEMEGLQY 600
  601 SEIPMLAGGN LPLMQQALSA VNNDYSLARM YAMGVDAWSL ANHFSQMRQV QGFEINGNTG 660
  661 SLTANPDCVI NRKLSWLQYQ QGQVVPAS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle