YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110616221, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGVMLYHTC PWLNLLNGPL MFKRRYVTLL PLFVLLAACS SKPKPTETET TTGTPSGGFL  60
   61 LEPQHNVMQM GGDFANNPNA QQFIDKMVNK HGFDRQQLQE ILSQAKRLDS VLRLMDNQAP 120
  121 TTSVKPPSGP NGAWLRYRKK FITPDNVQNG VVFWNQYEDA LNRAWQVYGV PPEIIVGIIG 180
  181 VETRWGRVMG KTRILDALAT LSFNYPRRAE YFSGELETFL LMARDEQDDP LNLKGSFAGA 240
  241 MGYGQFMPSS YKQYAVDFSG DGHINLWDPV DAIGSVANYF KAHGWVKGDQ VAIMANGQAP 300
  301 GLPNGFKTKY SISQLAAAGL TPQQPLGNHQ QASLLRLDVG TGYQYWYGLP NFYTITRYNH 360
  361 STHYAMAVWQ LGQAVALARV Q

Type	Start	End	Confidence
Signal Peptide	1	41	0.93
N-region	1	32
H-region	33	38
C-region	39	41
Cleavage Site	41	42
Non-Cytoplasmic	42	381	0.99