YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110806219, gi...
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLNFTVIVW LRLSIGGVYV LAFCRSSLKS KKYFIILLAL AAIAGLGTHA AWSSNGLPRI  60
   61 DNKTLARLAQ QHPVVVLFRH AERCDRSTNQ CLSDKTGITV KGTQDARELG NAFSADIPDF 120
  121 DLYSSNTVRT IQSATWFSAG KKLTVDKRLL QCGNEIYSAI KDLQSKAPDK NIVIFTHNHC 180
  181 MTYIAKNKRD AIFKPDYLDG LVMHVEKGKV YLDGEFVNH

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.60
Transmembrane Helix	8	24	0.73
Cytoplasmic	25	32	0.65
Transmembrane Helix	33	52	0.78
Non-Cytoplasmic	53	219	0.96