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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110805207, gi...
Protein type: Transmembrane
Type Confidence: 0.73
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIKQHNGNT KADRLAELKI RSPSIQLIKF GAIGLNAIIF SPLLIAADTG SQYGTNITIN  60
   61 DGDRITGDTA DPSGNLYGVM TPAGNTPGNI NLGNDVTVNV NDASGYAKGI IIQGKNSSLT 120
  121 ANRLTVDVVG QTSAIGINLI GDYTHADLST GSTSKSNDDG IIIGHSSTLT ATQFTIENSN 180
  181 GIGLTINDYG TSVDLGSGSK IKTDGSTGVY IGGLNGNNAN GAARFTATDL TIDVQGYSAM 240
  241 GINVQKNSVV DLGTNSTIKT NGDNAHGLWS FGQVSANALT VDVTGAAANG VEVRGGTTTI 300
  301 GADSHISSAQ GGGLVTSSSD ATINFSGTAA QRNSIFSGGS YGASAQTATA VINMQNTDIT 360
  361 VDRNGSLALG LWALSGGRIT GDSLAITGAA GARGIYAMTN SQIDLTSDLV IDMSTPDQMA 420
  421 IATQHDDGYA ASRINASGRM LINGSVLSKG GLINLDMHPG SVWTGSSLSD NVNGGKLDVA 480
  481 MNNSVWNVTS NSNLDTLALS HSTVDFASHG STAGTFTTLN VENLSGNSTF IMRADVVGEG 540
  541 NGVNNRGDLL NISGSSAGNH VLAIRNQGSE ATTGNEVLTV VKTTDGAASF SASSQVELGG 600
  601 YLYDVRKNGT NWELYASGTV PEPTPNPEPT PAPAQPPIVN PDPTPEPAPT PKPTTTADAG 660
  661 GNYLNVGYLL NYVENRTLMQ RMGDLRNQSK DGNIWLRSYG GSLDSFASGK LSGFDMGYSG 720
  721 IQFGGDKRLS DVMPLYVGLY IDSTHASPDY SGGDGTARSD YMGMYASYMA QNGFYSDLVI 780
  781 KASRQKNSFH VLDSQNNGVN ANGTANGMSI SLEAGQRFNL SPTGYGFYIE PQTQLTYSHQ 840
  841 NEMAMKASNG LNIHLNHYES LLGRASMILG YDITAGNSQL NVYVKTGAIR EFSGDTEYLL 900
  901 NDSREKYSFK GNGWNNGVGV SAQYNKQHTF YLEADYTQGN LFDQKQVNGR YRFSF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle