YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110804728, gi...
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.43
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINVLWSQMN VSKYVAIFSF VFIQLISVGK VFANADERMT TFRENIAQTW QQPEHYDLYI  60
   61 PAITWHARFA YDKEKTDRYN ERPWGGGFGL SRWDEKGNWH GLYAMAFKDS WNKWEPIAGY 120
  121 GWESTWRPLA DENFHLGLGF TAGVTARDNW NYIPLPVLLP LASVGYGPVT FQMTYIPGTY 180
  181 NNGNVYFAWM RFQF

Type	Start	End	Confidence
Non-Cytoplasmic	1	13	0.69
Transmembrane Helix	14	33	0.80
Cytoplasmic	34	156	0.69
Transmembrane Helix	157	176	0.43
Non-Cytoplasmic	177	194	0.69