YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110614267, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAGSAFAIV GHFFNSITDV VVQTMNTIFS ARIMKRLALT TALCTAFISA AHADDLNIKT  60
   61 MIPGVPQIDA ESYILIDYNS GKVLAEQNAD VRRDPASLTK MMTSYVIGQA MKAGKFKETD 120
  121 LVTIGNDAWA TGNPVFKGSS LMFLKPGMQV PVSQLIRGIN LQSGNDACVA MADFAAGSQD 180
  181 AFVGLMNSYV NALGLKNTHF QTVHGLDADG QYSSARDMAL IGQALIRDVP NEYSIYKEKE 240
  241 FTFNGIRQLN RNGLLWDNSL NVDGIKTGHT DKAGYNLVAS ATEGQMRLIS AVMGGRTFKG 300
  301 REAESKKLLT WGFRFFETVN PLKVGKEFAS EPVWFSDSDR ASLGVDKDVY LTIPRGRMKD 360
  361 LKASYVLNSS ELHAPLQKNQ VVGTINFQLD GKTIEQRPLV VLQEIPEGNF FGKIIDYIKL 420
  421 MFHHWFG

Type	Start	End	Confidence
Signal Peptide	1	53	0.53
N-region	1	44
H-region	45	50
C-region	51	53
Cleavage Site	53	54
Non-Cytoplasmic	54	427	0.98