YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110613988, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRHKDVAKS RLKMSNPWHL LAVGFGSGLS PIVPGTMGSL AAIPFWYLMT FLPWQLYSLV  60
   61 VMLGICIGVY LCHQTAKDMG VHDHGSIVWD EFIGMWITLM ALPTNDWQWV AAGFVIFRIL 120
  121 DMWKPWPIRW FDRNVHGGMG IMIDDIVAGV ISAGILYFIG HHWPLGILS

Type	Start	End	Confidence
Cytoplasmic	1	19	0.92
Transmembrane Helix	20	43	0.90
Non-Cytoplasmic	44	52	0.78
Transmembrane Helix	53	73	0.92
Cytoplasmic	74	84	0.80
Transmembrane Helix	85	102	0.73
Non-Cytoplasmic	103	106	0.48
Transmembrane Helix	107	126	0.59
Cytoplasmic	127	139	0.46
Transmembrane Helix	140	161	0.88
Non-Cytoplasmic	162	169	0.47