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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110613733, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKWCLFMAIN NTGSRRLLVT LTALFAALCG LYLLIGGGWL VAIGGSWYYP IAGLVMLGVA  60
   61 WMLWRSKRAA LWLYAALLLG TMIWGVWEVG FDFWALTPRS DILVFFGIWL ILPFVWRRLV 120
  121 IPASGAVAAL VVALLISGGI LTWAGFNDPQ EINGTLSADA TPAEAISPVA DQDWPAYGRN 180
  181 QEGQRFSPLK QIHADNVHKL KEAWVFRTGD VKQPNDPGEI TNEVTPIKVG DTLYLCTAHQ 240
  241 RLFALDAASG KEKWHYDPEL KTNESFQHVT CRGVSYHEAK AETASPEVMA DCPRRIILPV 300
  301 NDGRLIAINA ENGKLCETFA NKGVLNLQSN MPDTKPGLYE PTSPPIITDK TIVMAGSVTD 360
  361 NFSTRETSGV IRGFDVNTGE LLWAFDPGAK DPNAIPSDEH TFTFNSPNSW APAAYDAKLD 420
  421 LVYLPMGVTT PDIWGGNRTP EQERYASSIL ALNATTGKLA WSYQTVHHDL WDMDLPAQPT 480
  481 LADITVNGQK VPIIYAPAKT GNIFVLDRRN GELVVPAPEK PVPQGAAKGD YVTPTQPFSE 540
  541 LSFRPTKDLS GADMWGATMF DQLVCRVMFH QMRYEGIFTP PSEQGTLVFP GNLGMFEWGG 600
  601 ISVDPNREVA IANPMALPFV SKLLPRGPGN PMEQPKDAKG TGTESGIQPQ YGVPYGVTLN 660
  661 PFLSPFGLPC KQPAWGYISA LDLKTNEVVW KKRIGTPQDS MPFPMPVPVP FNMGMPMLGG 720
  721 PISTAGNVLF IAATADNYLR AYNMSNGEKL WQGRLPAGGQ ATPMTYEVNG KQYVVISAGG 780
  781 HGSFGTKMGD YIVAYALPDD VK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle