YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110769776
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTALAVIAKF WQEYTKTTPK KLKIIDAYLL YVFLTGVIQF IYCCLVGTFP FNSFLSGFIS  60
   61 CVSCFVLGVC LRLQVNPQNK NQFHGISPER GFADFIFAHV ILHLVVMNFI G

Type	Start	End	Confidence
Cytoplasmic	1	26	0.96
Transmembrane Helix	27	49	0.88
Non-Cytoplasmic	50	53	0.79
Transmembrane Helix	54	75	0.89
Cytoplasmic	76	90	0.90
Transmembrane Helix	91	110	0.80
Non-Cytoplasmic	111	111	0.87