YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110778047
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTEEQFQAA VNVIRNLPKN GAYQPSNEIM LRFYAYYKQA TEGPCQQPKP AFWEVVKKAK  60
   61 WDAWTRLGNM SRTEAMNNYV EELKKIVETM SYTDKVANFL DSLDSFCESV PPEDLELLLG 120
  121 PVLERMRSQP GMPLSGSPLA SRETSPHRVC NITRHIASSL ETSPATSHGT SPPDTDGEEE 180
  181 FIDTVESAPE RIQKDTIKTS NVIQKMTNAT TMQNLQRDLD RITTRVRSLE GQTLQALAPS 240
  241 TVHTQPTSYP EWWPLPECSP RLFTILMIWP FITQFLISLI HRYRQRRL

Type	Start	End	Confidence
Non-Cytoplasmic	1	261	0.94
Transmembrane Helix	262	281	0.90
Cytoplasmic	282	288	0.78