YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110771600
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTGAKKTRT GTRTSRGTSR STSTSTSTSR KPSRSAINEA PTRTRDNVTM HDDELTKSPN  60
   61 SSTMSARYIL PMSFHIGENE VILFDEWHPV DWQGLGWSMV GVILIASIYE GIKNYRDHLY 120
  121 INTTRLWKNK EINNRGTLLF SKIHFLQTII HVVQLVIGYC LMLIFMTYNI WLCIAVAFGT 180
  181 ALGYWLFSWD KSNGDSDDCC L

Type	Start	End	Confidence
Cytoplasmic	1	142	0.63
Transmembrane Helix	143	165	0.67
Non-Cytoplasmic	166	166	0.31
Transmembrane Helix	167	187	0.85
Cytoplasmic	188	201	0.52