YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110763671
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLLFINTTS LFVRKPLLEI GIRLLSSMAQ ALQTHGVVPD VIDKVPENVL KVTYPNQISV  60
   61 DIGKVLTPTQ VKDKPNVTWN GDANTYYTLC MTDPDAPSRK NPKFREWHHW LIGNIPGSEI 120
  121 AKGDVLSDYI GSGPPKDTGL HRYVFLLYKQ PGKLTFDERR LTNRSGQNRG NFSIRKFATK 180
  181 YKLGDPIAAN MYQAEFDDYV PLLYKQLEG

Type	Start	End	Confidence
Signal Peptide	1	31	0.51
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	209	0.99