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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110763631
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNRRGRSHC SQDHPEILEL RQESGLNVGT VHDSAANATR LRHSRHLDLR SQFSNDEEFA  60
   61 MQQDENHNHK PVFSNCSNYA PVVKEEEPVG TVVIQVHAKD RDNPDNGGTI TYSFVTAPGE 120
  121 KLKFEINNRT GLIRTTQVLD RDEPAREKEA YLTVLATDNG RPQLDDVCTF KVTIEDVNDN 180
  181 SPVFDKVAYT ESVPQDLPLS REVMRVSATD IDDGNNSVVY YSLSPKKPED GVYFRIDRNT 240
  241 GVIFLNKTID KVPDYKFSMT ATAQDQGENP KSNVIDLDIR VVESHKKAPV FLPRPAEPIR 300
  301 LQENFSDFDA SIVQLKAVLN SGDKLLFELV PGTTEQTNKG NTFRLESNKD VADIKLSQHL 360
  361 DYESNTQYTL IVRVQNKYQL AAETTVVIEV LDVNDNIPVF REMKKGSVLE NEPPGVPVMQ 420
  421 VRAIDADGTS AHNQVTYELD NFRDLFAIDK YTGNITTLTT FDREDEDTYN VKVIAVDNSP 480
  481 SALFKTGEHN KGQQVFRIEI ADKNDNAPHF TQAVYTANSI LENANINEAV TEVKALDSDT 540
  541 ASPVTYSIIF GNTDDSFYIE DTTGKIRVKK PLDYEKITEY NLTVRAFDGL YNDTAQVKIF 600
  601 IENVNDNPPV FEDFNKNPTI EEEKLVEGCI TTVVAYDPDI TNRNADQHIA YAIVKEDQQP 660
  661 LIGIDKSGCI TLKKPLDRDP PLGYPMWTVI VMARDEDGSP TALRELVMVN ITLIDINDNA 720
  721 PFLDMPYPVV WDENKPPGKI TELKARDWDS EENGPPFHFQ IDKNTADDEI QAKFAIRDAD 780
  781 LFARVEFNRE ERKSYDIPIA ITDSGTPPMT GTSTLTVIIG DENDNPMSEG SSSIFVYNYK 840
  841 GEAPKTEIGR VYVNDPDDWD LPDKHFAWAS THEGFLLNQD TGMITLLPGI SNDTFVLKFI 900
  901 VTEHSTYIPR HQVNAYVNVT VKELPEEAVE RSGSVRFFGM TAHDFVAPDE ETGVSRKEIF 960
  961 QERIADMLNT SVENVDVFTV LHSPHHNNES LLDVRFSAHG SPYYAPEKLN TILAQHAKEI1020
 1021 ERELKTDILL VNIDECLFEK QYCNNSCRSY LNASTVPYPV YTNTSTFVGV RAIVDPQCTC1080
 1081 HVYEPIVCLN GGTPLADRCE CPPGLEGPRC ELLGIGFHGD GWAVMPPPGQ ACDDSHLGLE1140
 1141 ITPHMDNGLV FYFGPMTYSP KMKIQDFMAL ELQQGYAVLY MDYGTGTVRL DQRHIKLTDG1200
 1201 KSHKIDIYFT KNAIEMKVDN CGISACISLT PPQGPNELLN VNSPMQIGGT LTNLAQLASQ1260
 1261 LGWDFKPTNK GFVGCIRNMT FNGNTYNLGM PSLSRNADPG CDHGMAKAVS FGIDTNFLVA1320
 1321 ILVCIAILLI LLLAVVVHRR KTDDLYKDMD DIRENIINYE DEGGGEVDTG YDLNVLRTIY1380
 1381 DAPPIDSKIP PVGMKTRGSD EVPDICGFLD GKKESCDKDP DTNPFDDVRH YAYEGEGNSE1440
 1441 GSLSSLASCT DDGDLKFNYL SNFGPRFRKL ADMYGEEPSD EESDGVGERE SESWHRKLRP1500
 1501 SFFAFSIILL LCLILNTGVE AQLNFSTGWG KRSQRIGVVE WGVRTECATQ AKPSVEQLLS1560
 1561 VYHLIQIEAR KMLDCRKLNE 

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