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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110749089
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRVNGRLPG SHAASDHERD PDLQPSCLVR TSSGGFYSIP KIPKNEYNNK NQSTGNSPIK  60
   61 VELQNNMDRV PLPYGHASSM IPMRRQSIRC HFVKGVDWCS WKLIAMILLM VSLCITAALA 120
  121 YVVVSSIVNR SYQGTKACAV LVSESADNTK PLSSDGNKTS SSASASSSQS SGRTRQQASS 180
  181 GGSMRASASS MLEHAYRKRR DTYNKHALHQ TVPSREQADE HPSKLEFVAA ASPRSEEQRS 240
  241 ARFTGDRPRG VVVVVHDKEH AAANSSSPPS SSLSSPSPSS SSTTYVSSSN NYYSHDPSSA 300
  301 ISSSSVNPTT DSSSYSSSSS SSSSSSFTDE ESQPSSPIID DSSTGHVPRT TTVESGIPGA 360
  361 YEVALPEVGV DSNEFRGEEV ESIAKRGRAK SKEEDDGTIG RVESVESVGE GIDDRILPEH 420
  421 RQRSSNVSSE DAVVPALVVV PEHAVDAAPG LDSSKSLEKV NEKKDGAMES EHILDVASPG 480
  481 SSKSLEKIKE KEGARENEHV VDVALPGSSK SLKEVNEKKE ETRESDHIVD TTPPGLSSSK 540
  541 FLKEVKKEED GAIENVHVID AAPPSSSKSL EKIKKEEEAR KSDHVIDAAP PDSSKSLEKI 600
  601 KEKKEEAREN DHTVHTALSK SLESGKSVES GGSGNSSDFS GVVKETRELP RDEDDNDSSP 660
  661 ESWPSRGKSY ERSEELLQRD YPSPIYNYNG QDEVEFVKLN QTMKNNDDDD DNNNNNDDDD 720
  721 RGSFGDDEVK TNDVPRRASI GDLRVITREE SDEEFLREFE RKFREEAEIP SASKGREGGR 780
  781 DDASVESNSA ESRPPTHQVK IIEVPVDRPP LSSTSTSSSS SSSSHRVLVN ITIASGDSAS 840
  841 SKPLYVLSVS VPTSGDGAVH DEERHETTGG EQRMHEERPT AEQETSSSSG RMAAKIARDP 900
  901 SEGNDDRLPP PPQPPSSPPP PIWAGGECEC SCPCMGSSSD EWDNDFSPVD ETPLNLDAGR 960
  961 EEHYATRNAS EETASDARQV EGRRREEEGS SVRSVSSEEE EEVKGETSSQ HDYVSGSEEN1020
 1021 SSTIDWTTSN YESESSGVSS VSGCSGTTPL PPEPTILILE GARTFPARSF PPDGTTFAQV1080
 1081 GLGQKLSKEI PPYSYWNMQF YQSEAAYVRF DYNIPRGASI GVYARRNALP THTQYDLLEV1140
 1141 LSGFKARTTR ASHVSVIKEV THYMEPGHWF LSLYNDDGDP QEVSFIAIIA EDMTHNCPNG1200
 1201 CSGKGECLLG HCQCNPGFGG EDCSESVCPV LCSQRGEYIN GECQCNPGWK GKECSLRHDE1260
 1261 CEVPDCNGHG HCTNGKCNCV RGYKGKYCEE VDCPHPTCSG HGFCAEGTCI CKKGWKGADC1320
 1321 SQMDKEALQC LPDCSGHGNF DLETQTCLCE PMWSGDDCSK ELCDLDCGPH GHCVDNACDC1380
 1381 LPGWSGELCN LKQCDPRCNE HGQCKNGTCL CVTGWNGKHC TMEGCPNSCS GHGQCRVSND1440
 1441 GQWECRCYDG WDGKDCNVLL EQNCNDGRDN DKDGLIDCAD PECCSNHICR SSQLCVSAPK1500
 1501 PIDILLRKQP PAITASFFER MKFLIDEGSL QNYARQETFN ESRSAVVRGR VVTHLGTGLM1560
 1561 GVRVSTSTPL EGFTLTRDDG WFDLLVNGGG AVTLQFGRSP FKPQSHIVFV PWNEVVIIDK1620
 1621 IVMSTAEEKQ PSHVPHACAA HDYDLMKPVV LATWKHGFQG ACPDKSAILA ESQVIQESLQ1680
 1681 IPGTGLNLVY HSSRAAGYLS TIQLQLTPEA IPPTLNLIHL RITIEGILFE KTFEADPVIK1740
 1741 FTYAWNRLNV YRQRVYGVTT AMVKVGYEYN DCKDVIWDVQ TTKLSGHDMS ISEVGGWNLD1800
 1801 IHHRYNFHEG ILQKGDGSNI YLKQKPRVIL TTMGDGHQRP LDCYDCDGQA SKQRLLAPVA1860
 1861 LATAPDGSIF VGDFNLVRKI LVDGTVRTVV RLNATRVSYR YHIALSPLDG SLYISDPESH1920
 1921 QIIRVRDTND YTDPDHNWET VVGSGERCLP GDEAHCGDGA LARDAKLAYP KGVAVSADNV1980
 1981 LYFADGTNIR MVDRDGIITT VIGNHMHKSH WKPIPCEGTL NVEEVHLRWP TELAINPLDN2040
 2041 SLHMIDDHMV LQLAPDGRVK VVAGRPLHCA SPSSSFDTEL ATHATLVMPQ SIAFGPSGNL2100
 2101 YIAESDSQRI NRVRVIGTDG KISPYAGAES KCNCLERGCD CFEADHYLAS TSKFNTISAV2160
 2161 AVSPDGVVHI GDQANYRIRS VMASIPDASG AREYEIYSPD TQEIYVFNRF GQHVATKNIL2220
 2221 TGESVYQFTY NVNTSNGKLS TVTDAAGNKV FLLRDYSSQV NSIENTKGQK CRLRMSRMKM2280
 2281 LHELSTPDNY NVTFDYHGPT GLLKTKLDST GRSYVYNYDE FGRLTTAVTP TGKVISLTFD2340
 2341 LSLKGAVVKV GQNNRKPISM LIKGSSVVTR IGEAEQRTTV LPDGSVGQVT PWAHTVSTDT2400
 2401 LPYSVLAEIE PLLGESYPVP AKQKTEIAGD LANRFEWRYF LRKLQGNKNR GNSKSVAQVG2460
 2461 RKLRVNGDVL LSLEYDRETN SVAVFMEDIE FLNVTYDKTA RPVKWGPRNG IFSGVELEYD2520
 2521 RFSRLTSWTW GDIGETYGFD RAGRLYEIKY SDGTSMVYAF KDMFSSLPLK VTTPRGSDYL2580
 2581 LQYDEAGALQ SLTTPRGHIH AFSLQTSLGF YKYQYYSPMN RHPYEILYND DGQILAKVYP2640
 2641 HQSGKVAYVY DHTGKLETTL AGLSSIHYTY QETTSLVHSI DINEPNFEMR IEYKYHAGIV2700
 2701 KDEKIKFGSK SGLDNARYRY QYDGNARISG IEVDINGKQL PQLRLKYNQN LGILEGVGDL2760
 2761 RIYRNLFNRS VMQDSSKQFF TVTDYDEHGR VKAVLMNIRS LDVFRMELEY DNRNRIKMRK2820
 2821 LSIGKDAMEK KEWTKMEKIT YNADGHVLEV ADTENNWQYA YDENGNVIGV TEHNEKIALG2880
 2881 YDSGDRVVQY GDVEFNSYDG RGFVVIRGEH KYRYNSRGQL IHASEHKKFQ IWYFYDDRGR2940
 2941 LVAWNDDREN ITQFFYANPK TPDLITHIHF PKSSKTFRFL YDSRNFLMTV ETSEQRFYVA3000
 3001 TDQNGSPLAL FDTNGNLIKE MRRTPFGRII KDTNPDFYLP IDFHGGLLDP NTKLVYLNKR3060
 3061 LYDPTVGQWM TPAWEQMANE LTTPTDIFIY RFRNNDPINF KQNVEYMTDL SSWLKLYGYD3120
 3121 ISAMLGSEYM KQMVYQPSAT VTSPQLTPDF GVMSGLQCIV NRVHEKFSDL GFVPKPLLKL3180
 3181 EPKTRNLLPR VAHRRAVFGE GILVSRVGGR ALVSVVDGVN SVVQDVVTSV FNNSYFLPLH3240
 3241 FSVHDQDVFY FVKDNALKIR DDMEELRRLG GMFNVSTHET TEHGSGTWKE LRLHNPDAAV3300
 3301 VIKYGADPEQ ERHRILKHAH KRAVERAWEI EKQLVMAGFQ GRGDWSKEEK DELISRGTVS3360
 3361 GYEGVDIHSV HRYPQLADDP GNVAFTRDTK RKRRKSGNRR NRIHRHDS

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