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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110761886
Protein type: Transmembrane
Type Confidence: 0.62
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKELLAHKN PTWWKRRSTL ERGLTVIAVC AVLLAIGFAI AFGVLAANIA SCNVSSRNGK  60
   61 GKEQLEYPSL TVINNCLALF LCCICAYARI DPVNSEGLPS TANALNGYRQ NKDIQVIDRG 120
  121 FPCDEDVCYT QECIHTASRL LKNMDREVEP CDDFYDFACG GFLKSTIIPD DKTTVNTFTG 180
  181 ISDELQNQLR TSIEEKSPPN EPKPFRLVKN LYKACMNKTV IEQQGLDPLL NILRKLGGWP 240
  241 ILENQWNETE FNWKESVYKF RKMGYSVDYF IDFSIGVDLK NSTKRIIDLD QAALGLSREY 300
  301 LSKGFNDKIV QAYYSYMVDI SVILGANKTD AERELRESLE FEMNLANISL PNEKRRNATL 360
  361 LYNPMTVREL SKTYPSIPWK EYFNTLLAPN IQVDEEEVVI VSVPNYIASL EKLLATTPKR 420
  421 VQANYVMWRA AASSVSYLTD EIRKRQLQYS TALSGKTERE PRWKECIDTV SGSLAISVGA 480
  481 MYVRKYFKQD AKNNAVEMVA DIRKEFTKIL KKVDWMDKDT KRSALDKAAN MSSHIAYPDE 540
  541 LLDDSKLEQF YEKLELTTDN YLEDILNLTL FGVEYSFNKL RQPVNKSDWV THGRPAIVNA 600
  601 FYSSLENSIQ FPAGILQGAF FNNDRPRYMN YGAIGFVIGH EITHGFDDQG RQFDKNGNLV 660
  661 DWWAPQTKEK YLEKAECIIH QYGNYTVEEV NLNLNGINTQ GENIADNGGI KEAYLAYQEW 720
  721 VKRNHVEPKL PGLPYNPQQL FWISAANTWC SKYRPEAMKL RITTGFHSPG KFRVLGPLSN 780
  781 MEEFSKDFNC PLGSKMNPEK KCAVW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle