YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110759146
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLPAVNGLQ PKAIRMAGSP VLENEDKTEI LDEPLFSTLD IILLSALLLA ALWWLMRRNK  60
   61 QEEYTPVTKS YSIQPTIFPT TQTSENSFIK KLKTSGRSLV VFYGSQTGTA EEFAGRLAKE 120
  121 GIRYKMKGMV ADPEECDMEE LIHLKTIPNS MAVFCLATYG EGDPTDNAME FIDWLKNGDP 180
  181 DLNGLNYAVF GLGNKTYEHY NEIALYVDHR LEQLGATRVF ELGLGDDDAN IEDDFITWKD 240
  241 KFWPTVCEFF GIEGAGEDVS IRQYKLTEHI DLSIERIYTG EIARLHSFKN QRAPFDAKNP 300
  301 FLAPVKINRE LHGSTSDRSC MHIEFDIEGS KMRYETGDHL AVYPVNNTEL VNKIGEKCGI 360
  361 NLDTVFTLTN TDEESTKKHP FPCPCSYRTA LTHYLDITSN PRTHVLKELA EYCSDPNDKE 420
  421 KLKLMASTSV DGKAAYQQWV VQENRNIVHI LEDIPSLKPA LDHLCELLPR LQCRYYSISS 480
  481 SPKLHPSSIH ITAVVVEYKT PTGRINKGVT TSWLKEKHPS HPPCYVPIFV RKSQFRLPTR 540
  541 LSTPIIMVGP GTGIAPFRGF IQERDLARKE GKEVGNTILY FGCRKKDEDF LYKDELEEYV 600
  601 KRGTLILHTA FSREQSQKIY VTHLLEKNKD ELWEIIGEQN GHIYVCGDAK NMARDVHNIL 660
  661 LKVVMEKGKM SELDAANYIK KMDSQKRYSS DVWS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle