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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110758395
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGGEGSPIN LLDHRASTTS GECANSDEDE RTTDNVSSTM TTVLAGDGLR RRKVIHAAKE  60
   61 TFDKASRLLR RKIPCTGHLM TPRRLWIQKV PTQECDVVVM FPSGTSDETL MWLLGRLRAG 120
  121 TPGLVVHVRH HASSDSYGFY LTAPFSVLLK AAEEVHLPKT LRQEFGGGLK EFVGSESSCF 180
  181 EGSDDEARFF TTQERQSLVL HLLHTLRAGP QDLHSLPGLK MVEGQAIIPK CISAGIISQV 240
  241 FPLHELPALE KLQRTWVRAF LSPQPLDDIC KYFGVKITMY FAWLGHYTTA LIVPAAVGAI 300
  301 YWIGIIGRNQ AVEDVAYVLF SVFNVIWATV YLETWKRRGA ELAYRWGTLD QRDDLLVEPR 360
  361 PLFTGTLETS PVTGRLEPTY PRWKRNMFRY FVSVPIIAAC LFFVFIVMIL SFQIQDWWDA 420
  421 RLESRGYGFW LSYVPKVLLA VVIALMDEAY FKVAIWLNDM ENYRLDTEYE NHLIYKVALF 480
  481 QFVNSFLSLF YIAFYLQDQE RLKEQLAALL IARQVIGNLK ESAVPYLIEQ LRLARLSFEL 540
  541 FGALSPSEAR PPPGEEREES QKEVDDKGER SDGGKSKQPR NVSQAELESS LYRYDGAFSE 600
  601 HLEMLSQLGY VCLFSSAFPL AAMAALLGNL LELRGDAFKL CFVLQRPFGR RVSNIGTWQN 660
  661 AMEAMGLVAI LVNCALIGLS GQVQRMFPEM SATQTILLIV ALEHIMLGIR FIIICAIPDI 720
  721 PHWVATEMAK VEFLRREAVR RLSSTPSPEQ HPATVIGRFV VSPADGESEE QQLLSNRTGD 780
  781 ATSSSLPDTP TLASSTQTPS SPPTPSAASV PRIAETPSVV QTPGSASSSE FATHFPTENS 840
  841 MGSVRDIHNS PRCSIPGGER GRRSREWLQN ESEASGGTDH YSHHLTIGPH GGVDWVRRLG 900
  901 LEAGGRKSSD SEISGAGTVG TGDELTLHRS TDCIVSKDLA SSSDSDLLRS APPWTVAHRN 960
  961 QKFRFSPERE REREKTEKQQ YQHHQREIQD HKQQLSYYAE KEKDSGLSDS SKTISSQEEE1020
 1021 KPSKEEREAK KTRVKQSLMK RARSVAIFSL KLKERRAREA EKAKEAEREA RWQQPQSCVG1080
 1081 GELSCIPIEK LISVDDIAAM ELRRLNH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle