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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110755909
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANIKFFTFL LCIILCANFF CKLATGEVYP YPGDCSKYQH CDNSGCFILS CGAGTEFNPN  60
   61 IGTCDYPLIY DPKESTTKPP KRREPVLPWY SPGPVDSKED LSRSAKWQVD SDYPIPRKPY 120
  121 VIEAGTKTWS PWKKNKGSEI EQRTEITRDS QSAINFEQDD NLSSKSNDQQ KNEQIGIKRD 180
  181 EEFYEGVPAD STKPREEKIL VSTETKWTVA RYDSKHGVQC PEFDSTGQFV YPPDCKFFVN 240
  241 CWKGRAFVQA CAPGTLFNPN TLECDFPQKV KCYGEEINNY YNFPTTERLD SSRLQEPKCP 300
  301 PHVTGLIAHP LDCTKFLQCA NGGTYIMDCG PGTVFNPAVM VCDWPHNVKG CEDALKSEEE 360
  361 TTKPFVPPDY EDHDGRLRYE KPQAKKITCP DDYTGLLPHP ETCKKFLQCA NGGTFIMDCG 420
  421 PGTAFNPSIS VCDWPYNVPG CKEDKQQPVD TSFKPWPSHD SSHSRTWHHK HNHTSQGKDW 480
  481 DPLKPTWRPI LKRPSSRINW NDTSDSNPPQ PQWPHRGHGS NDRNYNDRSH HYHHHHHFHS 540
  541 PTHDPKDTEA QQPVPSFHQP HHQTSGNQGV ENWHSNHGHH HEHHHYYHGR PQDRSEIIVP 600
  601 SNPWTDEEID QQSRFDTRKD HEGSLNQGFD HRGTQDRPET VPSNTWTVEE TGQQAQRPTF 660
  661 DMKKDTFNEE FDHRDTQDRP ETVDTWTVKE TVQEAQRPSF GELFKDNVPW NKDNDQESAS 720
  721 NRQERMGPGF SQAGFDETSI YANNRNYQPV DNSRFDTQIA GNRRIWNQTR LTENGFSNWN 780
  781 QQGREQMPNQ NRRWDQDPVN KDDKFYEGKF RPNIYQSTAD RQADSKLDTG ASKTNIFQHS 840
  841 KGQFGSGVKN TAFNSTKINP NGINVNINST RGHFITKEIE VNQGHSKMRT YRPNDLPGLN 900
  901 EFNKSDRNIY VDSRTNVDNI PLTVLQPPPI TSDNHPSGSN NILRNTNNSF GGHRTHRYHW 960
  961 TYNSSANSGN LSPSGNYNNR VLVPSRELQP PYPSLNKSLV LPFLSNFLKY SPIPSPDLQP1020
 1021 PDDHQSTNKF SIGWQLPNDP IERELPTYEN RNTFQPSSQL VPPIFESNVS GRYPNVPSTN1080
 1081 LEPPDQEFDS FFNDSVVNNA TREIPSLTIP PRKRFANTTE SSENSEISTT DPNVPTVWID1140
 1141 YENSSTIEHP DIVEPASEES EAVESVDVLS DKKEWKPVLV FKNVTETTTK ASVIMKIDKK1200
 1201 NVDVDLFNVD AAPFAKEDPP FPSYYIPPVE PLDHSKKTVM PTPISGQVIR LRGGSGPHDG1260
 1261 YVEVQGTNPG WGIVCDSRNG WTLKEAHVVC KQLGYTRGAE MAWQGRNGRN GMPTWIAANS1320
 1321 VSCQGDEDKF QSCKFTHVQE CRVERDAIGV RCALNRVANC RKDEVPHEEQ CYHLAEAESG1380
 1381 LNHQEALDYC TNRDSRLLDI TSQAENNFIS EWLVQKQPEI ASIMTSGVGF TTMGHTLWIW1440
 1441 EDSSRTKFRF TKWWPGWMED NKQPPSVGTR PRCIVMKRKF PCHERPDSIC VADYFFWDAE1500
 1501 DCASSNKGHS FICKRPYDDI GCIYGKGSQY AGNASITASG KDCLSWGDEK VAYPLEINVV1560
 1561 NREIREKLKN HNYCRNPNPN RENRPWCFTG PRAEREHCDI PPCGNIGTQR RSVSQCKPKH1620
 1621 FECLPGECIP SPWVCDEEED CTNGADERDC VSHMYLFKKY SKQKLEGYDV EKWLNTPLKT1680
 1681 CALRCKEADF ICRSFAHKAI ENICLLSDSN IGMTGKLKPS TEFDYYEMKD RSMNCEGMFV1740
 1741 CENQKCINQS QVCNGKNDCH DRSDENVCTV ENLDYEIRLA GSDYNNEGRV EVKILGIWGQ1800
 1801 VCDDGFGMID ADVICKELGF VLGALEVKPG GFYGNMDPST RFMVDQLRCR GNETSLRECD1860
 1861 FEGWGVHDCQ PEEAVGIVCK TAVNTCPDGQ WKCDNSPMCI STAFICDEVV DCQDGSDESP1920
 1921 EHCNVPFEIR LANGNTAYEG RIEVRHHGVW GTVCDDDFSN AAATVICRSL GFNGRALAKK1980
 1981 DGYFGPGEGP IWLDEVFCYG NETQLNRCEH NHWGEHNCNH EEDAGVICTP GDVNDSKFKW2040
 2041 EIPPEMPQKN INDILPTNCG RRFKDFNEDE DLIFQKVVRG NIAPKGSYPW QASIRVRGYS2100
 2101 KSNHWCGAVI ISPLHVLTAA HCLEGYNKKT YFVRAGDYNT EIDEGTEIEA NIEDYYIHEE2160
 2161 FRKGHRMNND IALVLLKGRG IPLGKNVMPI CLPSERIEYP AGLNCTISGF GSIETGKSTH2220
 2221 SKDLRYGWIP LLDQSVCRAG HVYGERAISD GMVCAGYLNE GIDTCDGDSG GPLVCLHNGV2280
 2281 FTLYGLTSWG QHCGKMNKPG VYVRVSYYRQ WIDKKCYLLS YVP

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