YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110755827
Protein type:	Transmembrane
Type Confidence:	0.59
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAISKIRSY AIFAAFLFFI EIATTLDCYQ CTSEEELSCG DSKLVLSTLR PANCNHVYDA  60
   61 QYCIKSIGRF GGGIGTKRFC SALDLGNYCD YVNQQGDKLT YRTCIYTCAG DGCNPATMLK 120
  121 PSISWMVLVG LLIIYKLFLK R

Type	Start	End	Confidence
Cytoplasmic	1	8	0.48
Transmembrane Helix	9	26	0.48
Non-Cytoplasmic	27	121	0.93
Transmembrane Helix	122	139	0.65
Cytoplasmic	140	141	0.61