YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109455977, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLLLDNFTL LCFSAAVESL RIANRMANET LYEWRIIGEG GDIVSCSAGS GFKLDGDLED  60
   61 LQRDDILLVC GGIDVQAATT KRVLGWLRRE SRKGVVLGGL CTAAYTLAKA GLLDGKKATI 120
  121 HWENQDSFAE DFEDVTLTKS VFVVDGNRIT TAGGTSSIDL MLKLIAEQQG EDLANLVADQ 180
  181 LIYTSIRTDQ DTQRLSVPTR IGVRHPKLSL VIQMMESNIE EPISPSTLAR DVGMSTRQLE 240
  241 RLFRRYLNRS PKRYYMELRL QKARNLLMQT DMSVINVALA CGFASPSHFS KCYRAHYDTT 300
  301 PYRERGSHAA RLSF

Type	Start	End	Confidence
Signal Peptide	1	19	0.75
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	314	0.98