YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110644762, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVMKRVITL FAVLLMGWSV NAWSFACKTA NGTAIPIGGG SANVYVNLAP AVNVGQNLVV  60
   61 DLSTQIFCHN DYPETITDYV TLQRGSAYGG VLSSFSGTVK YNGSSYPFPT TSETPRVVYN 120
  121 SRTDKPWPVA LYLTPVSSAG GVAIKAGSLI AVLILRQTNN YNSDDFQFVW NIYANNDVVV 180
  181 PTGGCDVSAR DVTVTLPDYP GSVPIPLTVY CAKSQNLGYY LSGTTADAGN SIFTNTASFS 240
  241 PAQGVGVQLT RNGTIIPANN TVSLGAVGTS AVSLGLTANY ARTGGQVTAG NVQSIIGVTF 300
  301 VYQ

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	303	0.98