YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|215489528, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHILDSLLAF SAYFFIGVAM VIIFLFIYSK ITPHNEWQLI KNNNTAAALA FSGTLLGYVI  60
   61 PLSSAAINAV SIPDYFAWGG IALVIQLLVF AGVRLYMPAL SEKIINHNTA AGMFMGTAAL 120
  121 AGGIFNAACM TW

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.90
Transmembrane Helix	7	28	0.92
Cytoplasmic	29	44	0.81
Transmembrane Helix	45	67	0.87
Non-Cytoplasmic	68	74	0.78
Transmembrane Helix	75	97	0.91
Cytoplasmic	98	106	0.80
Transmembrane Helix	107	129	0.88
Non-Cytoplasmic	130	132	0.81