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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110644310, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPAASFFYC GCFTMIKKAS LLTACSVTAF SAWAQDTSPD TLVVTANRFE QPRSTVLAPT  60
   61 TVVTRQDIDR WQSTSVNDVL RRLPGVDITQ NGGSGQLSSI FIRGTNASHV LVLIDGVRLN 120
  121 LAGVSGSADL SQFPIALVQR VEYIRGPRSA VYGSDAIGGV VNIITTRDHP GTEISAGWGS 180
  181 NSYQNYDVST QQQLGDKTRV TLLGDYAHTH GYDVVAYGNT GTQAQPDNDG FLSKTLYGAL 240
  241 EHNFTDVWSG FVRGYGYDNR TNYDAYYSPG LPLVDTRKLY SQSWDAGLRY NGELIKSQLI 300
  301 TSYSHSKDYN YDPHYGRYDS SATLDEMKQY TVQWANNIII GHGNIGAGVD WQKQSTAPGT 360
  361 AYVEDGYDQR NTGIYLTGLQ QVGDFTFEGA GRSDDNSQFG RHGTWQTSAG WEFIEGYRFI 420
  421 ASYGTSYKAP NLGQLYGSYG NPNLNPEKSK QWEGAFEGLT AGVNWRISGY RNDVSDLIDY 480
  481 DDHTLKYYNE GKARIKGVEA TANFDTGPLT HTVSYDYVDA RNAITDTPLL RRAKQQVKYQ 540
  541 LDWQLYDFDW GITYQYLGTR YDKDYSSYPY QTVKMGGVSL WDLAVAYPVT SHLTVRGKIA 600
  601 NLFDKDYETV YGYQTAGREY TLSGSYTF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle