YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110342761, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDMKSGNIS MKAILIPFLS LLIPLTPKSA FAQSEPELKL ESVVIVSRHG VRAPTKATQL  60
   61 MQDVTPDAWP TWPVKLGWLT PRGGELIAYL GHYQRQRLVA DGLLAKKGCP QPGQVAVIAD 120
  121 VDERTRKTGE AFAAGLAPDC AITVHTQADT SSPDPLFNPL KTGVCQLDNA NVTDAILSRA 180
  181 GGSIADFTGH RQTAFRELEQ VLNFPQSNLC LNREKQDKSC SLTQALPSEL KVSADNVSLT 240
  241 GAVSLASMLT EIFLLQQAQG MPEPGWGRIT DSHQWNTLLS LHNAQFYLLQ RTPEVARSRA 300
  301 TPLLDLIMTA LTPHPPQKQA YGVTLPTSVL FIAGHDTNLA NLGGALELNW TLPGQPDNTP 360
  361 PGGELVFERW RRLSDNSQWI QVSLVFQTLQ QMRDKTPLSL NTPPGEVKLT LAGCEERNAQ 420
  421 GMCSLAGFTQ IVNEARIPAC ALHQDK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle