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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110665642
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSPSVREAAS MYGTAVAVFL VILVAALQGS APAESPFPFH IPLDPEGTLE LSWNISYAQE  60
   61 TIYFQLLVRE LKAGVLFGMS DRGELENADL VVLWTDRDGA YFGDAWSDQK GQVHLDSQQD 120
  121 YQLLRAQRTP EGLYLLFKRP FGTCDPNDYL IEDGTVHLVY GFLEEPLRSL ESINTSGLHT 180
  181 GLQRVQLLKP SIPKPALPAD TRTMEIRAPD VFIPGQQTTY WCYVTELPDG FPRHHIVMYE 240
  241 PIVTEGNEAL VHHMEVFQCA AEFETIPHFS GPCDSKMKPQ RLNFCRHVLA AWALGAKAFY 300
  301 YPEEAGLAFG GPGSSRFLRL EVHYHNPLVI TGRRDSSGIR LYYTAALRRF DAGIMELGLA 360
  361 YTPVMAIPPQ ETAFVLTGYC TDKCTQLALP ASGIHIFASQ LHTHLTGRKV VTVLARDGRE 420
  421 TEIVNRDNHY SPHFQEIRML KKVVSVQPGD VLITSCTYNT EDRRLATVGG FGILEEMCVN 480
  481 YVHYYPQTQL ELCKSAVDPG FLHKYFRLVN RFNSEEVCTC PQASVPEQFA SVPWNSFNRE 540
  541 VLKALYGFAP ISMHCNRSSA VRFQGEWNRQ PLPEIVSRLE EPTPHCPASQ AQSPAGPTVL 600
  601 NISGGKG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle