YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110665638
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WRQLKKRAQD AMVILGGGGL LFASYLTATG DEHFYAELLM PSLQRLLDPE TAHRLAVRFT  60
   61 SLGLLPRTTF QDSDMLEVRV LGHKFRNPVG IAAGFDKHGE AVDGLYKMGF GFVEIGSVTP 120
  121 EPQEGNPRPR VFRLPEDQAI INRYGFNSHG LSVVEHRLRA RQQTQARLTE DGLPLGINLG 180
  181 KNKTSVDAAS DYAEGVRVLG PLADYLVVNV SSPNTAGLRS LQGKAELRRL LTKVLQERDA 240
  241 LKVAHKPAVL VKIAPDLTAQ DKEDIASVVR ELGIDGLIVT NSTVSRPASL QGALRSEPGG 300
  301 LSGKPLRDLS TQTIREMYAL TQGRVPIVGV GGVSSGQDAL EKIRAGASLV QLYTALTYRG 360
  361 PPVVGGVKRE LEALLKEQGF ARVTDAIGAD HRR

Type	Start	End	Confidence
Cytoplasmic	1	10	0.86
Transmembrane Helix	11	30	0.86
Non-Cytoplasmic	31	393	0.99