YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ZFPL1_XENTR
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLCKCPKRK VTNLFCFEHR VNVCEHCLVA NHAKCIVQSY LQWLQDSDYN PNCRLCNTLL  60
   61 SSKETARLVC YDLFHWSCLN DLATQLPPNT APAGYRCPSC QGPVFPPSNL VSPVAATLRE 120
  121 KLSTVNWARA GLGLPLIEVA EPVDDTMSHD ETDYRDWSVV NSSSDNLSET PETTSQTGYA 180
  181 YNSVPTSVAQ HSLNVNMSQD HAVTIRDTGS DSLTINAGSS PRKVYDTRET ARGQDAVIDF 240
  241 DDDKYRRRPT LSWLARILRN RSGSKSRPAS SMQRFLVILI IGVLGFLTLI LLMSKLGRAS 300
  301 ADNDPNLDPL LNPHIHVGKE

Type	Start	End	Confidence
Non-Cytoplasmic	1	271	0.57
Transmembrane Helix	272	293	0.88
Cytoplasmic	294	320	0.55