YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115497706, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVGTAAALL AALGGILWLA ARRFVGSSVQ RLHQGRDSGL MRGKTVLITG ANSGLGRATA  60
   61 AELLRLGARV IMGCRDRERA EEAAGQLRRE VCPAGGPDSG PNSGGAGELV VKELDLASLS 120
  121 SVRSFCQEML QEEPRLDVLI NNAGVFQCPY MKTEDGFEMQ FGVNHLGHFL LTNLLLGLLK 180
  181 SSAPSRIVVV SSKLYKYGDI NFEDLNSEQS YNKSFCYSRS KLANILFTRE LARRLEGTSV 240
  241 TVNVLHPGIV RTNLGRHIHI PLLVRPLFNL VSWAFFKTPE EGAQTAVYLA SSPEVEGVSG 300
  301 RYFGDCKEEE LLPKAMDESV ARKLWDISEV MVGILK

Type	Start	End	Confidence
Signal Peptide	1	21	0.97
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	336	0.98