YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90652841, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRSGRRTCL LMVFSMCSAS VLSQPLIKLP FISIWNAPTE RCKSRFGVEL DLSVFDIVHN  60
   61 PNQTFMGDNI TIFYSDKLGK YPHYGPNDEP IYGGVPQNAS LNEHLKKADE DLRKNIPDPE 120
  121 FQGLAIIDWE KWRPLWERNW DSKEVYWKAS RAIVKAKHPT WSPDQIETEA VKEFEASSMA 180
  181 FMVETLKLGR RERSGGLWGF YGFPCCYNYQ YKKNETYTGE CPALEMKRND KLAWMWNVSS 240
  241 ALYPDIYLDL GLRGRGQDIL LYSRYRILEA MRVREKTTHQ MTSVFPYARI AFTYSMEFLS 300
  301 QDDLVHTIGE SVALGASGVV LWGDGNFSRT KRACEAVRDY LDVTLGRYIV NVTEAAFLCS 360
  361 RKVCSSQGRC VRRDPSASVY LHLNPEMWSI IPRAQLPGPI TGGPSYVAHR RLWTGQEETS 420
  421 RFADSFRCQC FPGWEGEQCQ KPVPVETFT

Type	Start	End	Confidence
Signal Peptide	1	23	0.98
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	449	0.98