YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110347786
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGKILLLAA LCAGVNCRYL IIEEPVYYIQ HYDEPEEPAS MRVRRDAHGA VTVNSDGTSG  60
   61 AVVKVPFAGN DKNIVSAIGS VDLTDKLKVG AATAGLALDN VKGHGLSITD THIPGFGDKL 120
  121 TAAGKVNIFH NDNHDLTAKA FATRNMPNLP AVPNFNTVGG GLDYMFKDKI GASATAAHTD 180
  181 FINRNDYSLD GKLNLFKSPD TSIDFNAGFK KFETPFIKSS WGA

Type	Start	End	Confidence
Signal Peptide	1	17	0.99
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	223	0.99