YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109895306, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPRPRCKLR TVLIVTLLVV LLVHISSSER VTRRRLRRPL KTTQSVSVTK DQDVSSSVNR  60
   61 FRLRSRPGHR KTDNSLSATS KKDKDGYKVV CYYTNWSQYR VKIGKFTPEH IIPDLCTHII 120
  121 FAFGWLKKGK LSSFESNDET KDGKVGLYER IQKLKKANPS LKTLLAIGGW SFGTQKFKDM 180
  181 ASTRYARQTF IFSAIPFLRD RGFDGLDIDW EYPKGSEDKK NYVLLLKELR EAFEAEAQEI 240
  241 KKPALLLSAA VPVGPDNIKA GYDVPAVSSY LDFINLMAYD FHGKWERETG HNAPLYSPSS 300
  301 DSQYQKQLNV EHAANLWVKL GTPKEKLVIG MPTYGRTFTL SNTAKFGVHA PASGGGKEGT 360
  361 YTKESGFLAY YEVCELLQNG ATYIWDDEMK VPYAVNGDQW IGFDDEKSIR NKMKWIKDNG 420
  421 FAGAMVWTID MDDFSGTVCG GQVKYPLIGA MREELRGISR GKNAKDVDWQ KIAGAVEEDD 480
  481 EDAIEKPAPV KISVQEVLNR VRKPTKKLHL KNSPISKKVR PPQVLCYITS WSQKRPGAGK 540
  541 FTPEDINPSL CTHIIYAFAT LKDHKLAEAS DKDPEMYDRV VALREKNPDL KILLAIGGWA 600
  601 FGSTPFKELT SNVFRMNQFV YDAIDFLREF QFNGLDVDWE YPRGADDRAA YVNLLKELRV 660
  661 AFEGEAKTSG QPRLLLTAAV PASFEAIAAG YDVPEISKYL DFINVMTYDF HGQWERTVGH 720
  721 NSPLFPLESA TSYQKKLTVD FSAREWVKQG APKEKLMIGM PTYGRSFELV NKTQFDIGAP 780
  781 ASGGGTPGKY TAEAGFMSFY EICDFLHEDN TTLVWDNEQQ VPFAYRGNQW VGFDDERSLK 840
  841 TKMAWLKEEG FGGIMIWSVD MDDFRGSCGS GKYPLINAMR QELEGYKVKL EYDGPYETSI 900
  901 SSGQYTTKDP NEVTCDEEEG HISYHPDKAD CRMYYMCEGE RKHHMPCPSN LVFNPDQNVC 960
  961 DWPENVEGCM QHTAAPPTKR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle