YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|92898955
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKSTAKDAQ DLIRTLWSAY SATPTNLKII DHYVVFAVFT ALIQVVYMAL VGTFPFNSFL  60
   61 SGVLSCVGTA VLAVCLRIQV NKENKEFKDI APERAFADFV LCNVVLHLVI MNFLG

Type	Start	End	Confidence
Cytoplasmic	1	28	0.98
Transmembrane Helix	29	51	0.87
Non-Cytoplasmic	52	58	0.75
Transmembrane Helix	59	80	0.91
Cytoplasmic	81	94	0.90
Transmembrane Helix	95	114	0.76
Non-Cytoplasmic	115	115	0.85