YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|92898950
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATLFPLFNP ISHSFTFPSL RAPPSRNSSP LLLTGCRRPR PATVVTRAGA STSSYAFAIA  60
   61 LPLSLLGITV FTALRIGQKL DQDFYEEMAK NEAIMEIDEE EEEDNDDDDV ETYSQEEQEP 120
  121 VLPRGRNRPK REA

Type	Start	End	Confidence
Cytoplasmic	1	52	0.54
Transmembrane Helix	53	74	0.74
Non-Cytoplasmic	75	133	0.71