YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CUTA1_ORYSJ
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLLPSPLGS LSAAATAAPR RAAAAAGLSP LLLRRRAPIA GALLFLSLGA FAGVRSLSSS  60
   61 ASARMESTST TVPSIVVYVT VPNKEAGKRL AGSIISEKLA ACVNIVPGIE SVYWWEGKVQ 120
  121 TDAEELLIIK TRESLLDALT EHVKANHEYD VPEVIALPIK GGNLKYLEWL KNSTRES

Type	Start	End	Confidence
Signal Peptide	1	25	0.97
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	177	0.84