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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113638749, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSSALVV VVAVLALAEA AVAFSGYNTS AGAVAGKLNV HLVPHSHDDV GWLKTIDQYF  60
   61 VGTNNSIQGA CVMNTLDSVV DALILDPARK FVFAEQAFFQ RWWAEKSPKI QAIVHKLVDS 120
  121 GQLEFINGGW CMHDEAAVHY IDMIDQTTLG HRVIKKQFNK IPRAGWQIDP FGHSAVQGYL 180
  181 LGAELGFDSM HFARIDYQDR AKRKGDKGLE VIWRGSRTFG SSSQIFTNAF PVHYSPPDGF 240
  241 GFEIFDDFVP VQDDMLLFDY NLKERVNDFV AAALKQANVT RTNHIMWTMG DDFNYQYAES 300
  301 WFRNMDRLIN YVNKDGRVHA LYSTPSIYTD AKHASNESWP LKYDDYFPYA DAKNAYWTGY 360
  361 FTSRPTFKRY IRMISGYYLA ARQLEFLVGR SSLGLFTSSL EDPLGIAQHH DAVSGTAKQH 420
  421 TTDDYSKRLA IGVSQVEKGV NTALSCLTSS KGTCTATKFS QCQLLNISYC PSTEEGISSA 480
  481 KSLVIVVYNP LGWERSDFVR VPVNDANLIV KTSDGTSLES QLVEVDIVTA RLRKLYIKAY 540
  541 LGITSDKPPK YWLVFQASVP PLGWNTYFIS KSTGTGSNGM GYVSTMVSPS NDTIEIGPGP 600
  601 LKMSYSSKSG QLKRMFNSIS AVDLPIQQSF LWYASSTGDS EDSQASGAYI FRPNRTTPTI 660
  661 VSGMAPLKVI HGPLVDEVHQ QFSSWIYQVT RLYKNKEHAE VEYTIGPIPV DDDDDIGKEV 720
  721 VTRLTTNMAT NKIFYTDSNG RDFLERVRNH RDDWDLNLSQ PVAGNYYPVN QGIYVADGKY 780
  781 ELSVLVDHAV GASSIQDGQI EVMLHRRLSA DDGRGVGEPL NEVVCVDQKC DGLVARATYY 840
  841 INVNKKGHGA HWRRTYSQQV YSPFLVAFAH EDERSWKSNN IAKASTVEGN YSLPDNVAII 900
  901 TLQSLDDGTT LLRLAHLFQA QEDTQYSVMA KVELRKLFGK RIIKDLTETS LSANQKKSEM 960
  961 KKLNWRVTGE SKTDPAPLKG GPVDSHALVV ELGPMEIRTF LLKF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle