YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|124294783, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAISSSTSGT SSSLPSRTTV MLLLIFFTAS LGITDAQVGV CYGMQGNNLP SVSEVIALYK  60
   61 QSNIKRMRIY DPNQAVLEAL RGSNIELILG VPNSDLQSLT NPSNANSWVQ KNVRGFWSSV 120
  121 RFRYIAVGNE ISPVNGGTAW LAQFVLPAMR NIHDAIRSAG LQDQIKVSTA IDLTLVGNSY 180
  181 PPSAGAFRDD VRSYLDPIIG FLSSIRSPLL ANIYPYFTYA DNPRDISLPY ALFTSPSVVV 240
  241 WDGQRGYKNL FDATLDALYS ALERASGGSL EVVVSESGWP SAGAFAATFD NGRTYLSNLI 300
  301 QHVKGGTPKR PNRAIETYLF AMFDENKKQP EVEKHFGLFF PDKRPKYNLN FGAEKNWDIS 360
  361 TEHDATILFL KSDM

Type	Start	End	Confidence
Signal Peptide	1	36	0.98
N-region	1	27
H-region	28	33
C-region	34	36
Cleavage Site	36	37
Non-Cytoplasmic	37	374	0.99