YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|113550159, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASPPPGAHR AASSSGALAP AAFPAASHFA SRAAAPFLRQ QPHPGGGGDS DGDNAVEEVD  60
   61 EGDDDEDDEE EEAELADGAP CSSQQRCAST PGIGRAGMNR GNGMRQIEEE QQWQHSHIYN 120
  121 CGNEQYGHAS SREDEPSTIP REMRVENGYG VIGRREGGPA SSYWDLLRAH LSDPLTWKAC 180
  181 GKCGQPITED SIRPNLALRL AVQAFKREEE SAKSLKRRRE RLEQCSKLCS FSEMRTNVAM 240
  241 MNQIQLRFLE TLAFVSVCPI FVTSKMNFSG QQKDPRTICG TRSSCDSTVS KWMVRNIFFP 300
  301 SFNMIIVDIK HRAYPVPAHQ VCGEDLRQCR ECEVAIPFSG

Type	Start	End	Confidence
Signal Peptide	1	33	0.94
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	340	0.98