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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|222625009, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.61
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASPPPRSP SSGDPAEAAD LAASAAAALA SPARVWSSLL ARLPSLSDYS RLLSVGRGRG  60
   61 RRRRRAALPL PIRPAAAHSA RIAGQMPKAF DILQDVAQHT LSNLHDIQKS LIFWQSKAEG 120
  121 TSSQKLYFMI FERGPRAFVE AAWQTLTRLK SNGSPVPHLL HSASDMVSTK LAVLTSMQHC 180
  181 LAAFLAEVYF EVDKCRKGLT ESSDKSLHTL FIVLNSVFSK LEVSFRNAVE GQTLLCTHDG 240
  241 KSPELIFERL PEVDVESSEW TEVLSANAIT LIYQNLQKFD DFISDQFSNH KRPRNTTIYW 300
  301 LPYTCGALGL SACSLWLLRH SSLMGSSDID NWIQDAKESM VGFWDVHVGQ PIISIRDELF 360
  361 ETFKQRSKHE MEKQEVQQTE ESLRRMLLDF CGNTSNEKPP QDMSELAMME IVMKRYEKEA 420
  421 MHPFKGLSSG KLTCALSIQI EKHKLALLEA MLELDQILRA NEINFAILAA LPAFGVSLLL 480
  481 LFAVRAWATH GRGAEGRGRT ARRQRRLLLA DVEKRLMEFQ NCMANGMEEE ACCKFGLTLY 540
  541 TLDRLYKAVE SQARETGEWS SLREDMFDLA KPGVGMEDKL VLLSRLKGMY DCLLPSPSGV 600
  601 LPRL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle