YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115452627, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLIRLTMLI FIAILLAGRT CVLVVAGGGM PATFVFGDSL VDAGNNNYLV SLSKANYPPN  60
   61 GIDFDGHQPT GRYTNGRTIV DILGQEMSGG FVPPYLAPET AGDVLLKGVN YASGGGGILN 120
  121 QTGSIFGGRI NLDAQIDNYA NNRHELIKRH GELEAVTLLR GALFSVTMGS NDFINNYLTP 180
  181 IFGVPERAVT PPEVFVDALI SKYREQLIRL YLLDARKIVV ANVGPIGCIP YLRDTTPTVG 240
  241 TACAEFPNQL ARNFNRKLRG LVDELSANLT GSRFLYADVY RVFSDIIANY KSHGFEVADS 300
  301 ACCYVSGRFG GLLPCGPTSQ YCADRSKYVF WDPYHPSDAA NALIARRIID GEPADIFPIN 360
  361 VRQLITS

Type	Start	End	Confidence
Signal Peptide	1	26	0.89
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	367	0.99