YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|125585119, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTSLLPTTS GGGHLCPSPP PSRRRRFCQV AAAAGGIGRR AVSLAGVASW LTATAAGRAD  60
   61 ASPFDKYVKK KKLEPLETYV PAVLLTQDQF RDLEKSLEFE KPRYDESRSL LRSGPASSLR 120
  121 INIRAVAQYA SSSGQGKAAS DAVDECLRLL QTVPSAVLDK GKAIADAYRT PTDDYEMGDA 180
  181 TELDPRLKQL QDIL

Type	Start	End	Confidence
Signal Peptide	1	55	0.53
N-region	1	46
H-region	47	52
C-region	53	55
Cleavage Site	55	56
Non-Cytoplasmic	56	194	0.98