YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|125542540
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPQKRTTLV YSFVARGAVV LADHAEVSGN FASVAAQCLQ KLPSTNNRHS YNCDGHTFNY  60
   61 HVHDGFTYCV VATESAGRQL PVGFIERVKE DFSKKYSGGK AKNATANSLK REYGPKLKEH 120
  121 MKYCDAHPEE IDKLAKVKAQ VTEVKGVMMQ NIEKVLDRGE KIELLVDKTE DLRSQAQDFR 180
  181 KAGTKIRRKM WWENMKMKLI VFGIVVALIL VIILTVCRDL NCW

Type	Start	End	Confidence
Cytoplasmic	1	196	0.91
Transmembrane Helix	197	217	0.93
Non-Cytoplasmic	218	223	0.82