YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|108706168
Protein type: Globular with Signal Peptide
Type Confidence: 0.33
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAPAAHLSP ASSAVPSRNH GLLLHLRFLL SSSVSHLSAR ENSNPPSGCW FSCQKQAILP  60
   61 VPVSSRLPPP PSCYYSVLLE EHWSPRLPQS PLTTPGASYK NRHAKNLQNH TETSDLRGFP 120
  121 SESTKMPVMA PTASLLLSPR PLPASRRVPS LPALSASGRL RLRRARADTR LRVAAPPSVP 180
  181 GEADQAPGET EPSTSSADEK FVWRDHWYPV SLVEDLDPSV PTPFQLLNRD LVIWKDPKSG 240
  241 EWVALDDRCP HRLAPLSEGR IDETGCLQCS YHGWSFDGSG ACTRIPQAAP EGPEAKAVRS 300
  301 PKACAIKFPT LVSQGLLFVW PDENGWEKAT ATKPPMLPKE FEDPAFSTVT IQRDLYYGYD 360
  361 TLMENVSDPS HIEFAHHKVT GRRDRARPLP FKMESSGAWG YSGSNSGNPR ISATFVAPCY 420
  421 ALNKIEIDTK LPIFGDQKWV IWICSFNIPM APGKTRSIVC SARNFFQFSM PGKAWWQLVP 480
  481 RWYEHWTSNL VYDGDMIVLQ GQEKIFLSAS KESSADINQQ YTKITFTPTQ ADRFVLAFRA 540
  541 WLRKFGNSQP DWFGNPSQEV LPSTVLSKRE MLDRYEQHTL KCSSCKGAYN AFQTLQKVFM 600
  601 GATVAFCATA GIPADVQFRL LLAAAALVSA AVAYAFYTLQ KNFVFVDYVH AEID

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle