YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|108706066, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPLTSALLS RSSSTRIPAA AAAAAAISNP AGAAASSSSP SPPPPSSRPR PASPFASGLA  60
   61 GRIFGGRRAA ARSSSSAAAV FERRFASAAA KNSYDEILTG LAKPGGGAEF GKYYSLPALS 120
  121 DPRIERLPYS IRILLESAIR NCDEFQVTGK DVEKILDWEN SAPKQVEIPF KPARVLLQDF 180
  181 TGVPAVVDLA CMRDAMSKLG SDPNKINPLV PVDLVIDHSV QVDVARSENA VQANMELEFH 240
  241 RNKERFGFLK WGSTAFRNML VVPPGSGIVH QVNLEYLARV VFNNGGILYP DSVVGTDSHT 300
  301 TMIDGLGVAG WGVGGIEAEA TMLGQPMSMV LPGVVGFKLT GKLRNGVTAT DLVLTVTQML 360
  361 RKHGVVGKFV EFYGGGMSEL SLADRATIAN MSPEYGATMG FFPVDGKTLD YLKLTGRSDD 420
  421 TVAMIESYLR ANKMFVDYNQ PEAERVYSSY LELNLEEVEP CLSGPKRPHD RVTLKNMKSD 480
  481 WLSCLDNDVG FKGFAVPKES QGKVAEFSFH GTPAKLKHGD VVIAAITSCT NTSNPNVMLG 540
  541 AALVAKKACE LGLEVKPWIK TSLAPGSGVV KKYLDKSGLQ KYLDQLGFHI VGYGCTTCIG 600
  601 NSGELDETVS AAISDNDIVA AAVLSGNRNF EGRVHALTRA NYLASPPLVV AYALAGTVNI 660
  661 DFEKEPIGIS KDGKEVYFRD IWPSTEEIAE VVKSSVLPDM FKSTYEAITK GNPMWNELSV 720
  721 SASTLYPWDP TSTYIHEPPY FKDMTMSPPG PRPVKDAYCL LNFGDSITTD HISPAGSIHP 780
  781 DSPAARYLKE RGVERKDFNS YGSRRGNDEI MARGTFANIR LVNKFLKGEV GPKTIHIPSG 840
  841 EKLSVFDAAT KYKNEGHDTI ILAGAEYGSG SSRDWAAKGP MLQGVKAVIA KSFERIHRSN 900
  901 LAGMGIIPLC FKSGEDADTL GLTGHERFTV HLPANVSEIK PGQDVTVTTD NGKSFTCTLR 960
  961 FDTEVELAYY DNGGILPYVI RKIAEQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle