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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109471996, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIGLLRLAL GPVASDTQWD IEGSGVPAAA AAAARWGGAR EKRGLARGTK CSVTSDLDFP  60
   61 AQVIPLKTLN AVASVPIMYS WSPLQQNFMV EDETVLHNIP YMGDEVLDQD GTFIEELIKN 120
  121 YDGKVHGDRE CGFINDEIFV ELVNALGQYN DDDDDDDGDD PDEREEKQKD LDDSRDDKET 180
  181 CPPRKFPADK IFEAISSMFP DKGTAEELKE KYKELTEQQL PGALPPECTP NIDGPNAKSV 240
  241 QREQSLHSFH TLFCRRCFKY DCFLHPFHAT PNTYKRKNTE TALDNKPCGP QCYQHLEGAK 300
  301 EFAAALTAER IKTPPKRPGG RRRGRLPNNS SRPSTPTISV LESKDTDSDR EAGTETGGEN 360
  361 NDKEEEEKKD ETSSSSEANS RCQTPIKMKP NIEPPENVEW SGAEASMFRV LIGTYYDNFC 420
  421 AIARLIGTKT CRQVYEFRVK ESSIIAPVPT EDVDTPPRKK KRKHRLWAAH CRKIQLKKDG 480
  481 SSNHVYNYQP CDHPRQPCDS SCPCVIAQNF CEKFCQCSSE CQNRFPGCRC KAQCNTKQCP 540
  541 CYLAVRECDP DLCLTCGAAD HWDSKNVSCK NCSIQRGSKK HLLLAPSDVA GWGIFIKDPV 600
  601 QKNEFISEYC GEIISQDEAD RRGKVYDKYM CSFLFNLNND FVVDATRKGN KIRFANHSVN 660
  661 PNCYAKVMMV NGDHRIGIFA KRAIQTGEEL FFDYRYSQAD ALKYVGIERE MEIP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle