YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109471955
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRALLVLVLV GAAVAFPVDD DDKIVGGYTC QEHSVPYQVS LNSGYHYCGG SLINDQWVVS  60
   61 AAHCYKSRIQ VRLGEHNINV LEGDEQFVNA AKIIKHPNFD RKTLNNDIML IKLSSPVKLN 120
  121 ARVATVALPS SCAPAGTQCL ISGWGNTLSF GVNDPDLLQC LDAPLLPQAD CEASYPGKIT 180
  181 NNMVCAGFLE GGKDSCQGDS GGPVVCNGEL QGIVSWGYGC ALPDNPGVYT KVCNYVDWIQ 240
  241 DTIAVN

Type	Start	End	Confidence
Signal Peptide	1	15	0.99
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	246	0.99