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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109507763
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGCQRAQAPE IREGSLVISN ARLTLEPGSG APVASVGPGS PGMLQGTRTR GPRSGLVHLG  60
   61 LLRARCGRGT KAAPPRPSRP RPAGGGGTPR VRRGSSAPAG AAAGGGAGRT ARQPGAARPE 120
  121 PVGAVLEAAA GAWPQRGEPR APEPAAAAMP LLFLERFPWP SLRTYTGLSG LALLGTIVSA 180
  181 YRALSQPEDG SGEPEPLTAP LQPEALAPAR LTPGGPRVRD VAQYLLSDSL FVWVLVNTAC 240
  241 CVLMLVAKLI QCIVFGPLRV SERQHLKDKF WNFIFYKFIF IFGVLNVQTV EEVVMWCLWF 300
  301 AGLVFLHLMV QLCKDRFEYL SFSPTTPMSS HGRVLSLLIA MLLSCCGLAV VCCVTGYTHG 360
  361 MHTLAFMAAE SLLVTVRTAH VILRYVIHLW DLNHEGTWEG KGTYVYYTDF VMELMLLSLD 420
  421 LMHHIHMLVI LPCGCAIVVV VCIMRCLGLC EGNGFFPACC VWACCVLCRF AVATAEELAV 480
  481 NNDDCAICWD SMQAARKLPC GHLFHNSCLR SWLEQDTSCP TCRMSLNIAD GSRAREDHQG 540
  541 ENLDENLVPV AAAEGRPRLN QHNHFFHFDG SRIASWLPSF SVEVMHTTNI LGITQASNSQ 600
  601 LNAMAHQIQE MFPQVPYHLV LQDLQMTRSV EITTDNILEG RIQVPFPVQR SDSLRPALNS 660
  661 PVERPGTDLE EGEASVQTER VPLDLSPRLE ETLDFSEVEL EPVEVEDFEA RGSRFSKSAD 720
  721 ERQRMLVQRK DDLLQQARKR FLNKSSEDDG ASERLLPSEG TSSDPVTLRR RMLAAAAERR 780
  781 LQRQQTT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle