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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109507715
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSLREDFDN PEQLTVLWWA RKSQNSPASD PKPSHLWTGE YQIKSNVNRQ NAKYVLQGEQ  60
   61 AGKIFRVDAD TGDVLAYERL DREKVSEYFL TALIVDKKTN KNLEQPSSFT VKVHDVNDNW 120
  121 PVFTHQVFNA SVPEMSAIGT SVIRVTATDA DDPTVAGHAT VLYQMVKGNE YFAIDNSGLI 180
  181 FTKDKNLDRE TRAEYKIVVE AQDAQGLRGE SGTATVLIRL EDINDNFPIF TQSTYTFSVP 240
  241 EDIRVGKPLG SLSVEDPDEP QNRMTKYSIM QGEYRDTFTI ETDPDRNEGI IKPTKPLDYE 300
  301 LIQQYTFHIE ATDPTIRLGY LSSTAGKNKA KIIINVLDVD EPPVFQRRFY HFHLPENKKK 360
  361 PLIGTVVAKD PDKAQRSIGY SIRKTSDRGQ YFRITKQGNI YNEKELDRET HAWYNLTVEA 420
  421 NELDSRGNPV GKESIVQIYI EVLDENDNAP EFAQPYEPKV CENAAQGKLV VQISATDKDV 480
  481 VPVNTKFKFA LKNEDSNFTL INNHDNTANI TVKYGQFNRE HTKFHYLPVL ISDNGMPSLT 540
  541 GTGTLTVAVC KCNEQGEFTF CEEMAAQAGV SIQALVAIFL CILTITVITL LIFLRRRLRK 600
  601 QAHAHSKSAL EIHEQLVTYD EEGGGEMDTT SYDVSVLNSV RTGSNKPLRS TMDARPAVYT 660
  661 QVQKPPRLAP SLHGGPREMA TMIEVKKEEA DNDGGGPPYD TLHIYGYEGT ESIAESLSSL 720
  721 STNSSDSDID YDFLNDWGPR FKMLAELYGS DPQEELII

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle