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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109505000, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPPRKVFKT TLLFLLLSHS LASVPYESQP GASSSHGQNC VGCVVVISLI EQLAEVHNSS  60
   61 VQVAMERLCS YLPEKLFLKP SCYFLVQTFG SDIIKLLGEA MKADVVCYAL EFCKQDAVQS 120
  121 QCHLYSLPQE AWKSSLEKAR QVLRKSSTMK YSRSGHNICS LPFFTKICQK IELSMKKAVP 180
  181 FKDGDSDKYS VFPTLRGYHW RGRDCNDKDK TVYPGRRPDN WDIHQDSNCN GIWGIDPKDG 240
  241 IPYEKKFCEG SQPKGIILLG DSAGAHFHIP PEWLTASQMS VKSFSNLPSA LTDELNWPQL 300
  301 SGVTGFLDST SGIEEKSIYH HLRKRNHCNH RDYQSISKNG ASSRNLKNFI ESLSRNQALD 360
  361 HPAIVIYAMI GNDVCNGRAD TIPGMTTPEQ MYANVMQTLK HLNSHLPNGS HVILYGLPDG 420
  421 TFLWDSLHNR YHPLGQLNKD VTYAQFFSFL SCLQVSPCNG WMSSNKTLRA LTSERAEQLS 480
  481 NILKKIATTK TFANFDLFYM DFAFHEIIED WQKRGGQPWQ LIEPVDGFHP NEVASLLLAN 540
  541 RVWKKIQLQW PHVLGKENPF NSQIEEVFGD QGGH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle