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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109480013, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCNIWAPPAP QPRPVTWGPR SEVRAGESLG GGGEMGALGR VLLWLQLCAL TRAAYKLWVP  60
   61 NTSFDTASNW NQNRTPCAGD AVQFPADKMV SVLVRDSHAI SDMLLPLNGE FVLASGAAFS 120
  121 AAGGDSDPAC NPGAPLLFRN PDRFSWLDPH LWSSGTQESG IFFVDAERVP CTYDDVLFPR 180
  181 NGSFRVALGP GPNPVHVRSV SAVGQTFTRD EDLAAFLASR EGRLRFHGSG ALRVGSQACT 240
  241 DATGCVCGNA ETLPWICASL LQPLGGRCPE ATCQDPVRPQ GQCCDLCGAI VSLTHDPTFD 300
  301 LERYRARLLD LFLKQPQYQG LQVAVSKVLR DAHTEIQVVL LETRPATGAA GQLGHALLQD 360
  361 AVAQGSVLGI VSATLRQSGK PTAANSALDQ NGSGAGLAGG VAAVVLLALV GTVLLLLHRS 420
  421 GRLRWRRHGD AEPTSAGLPL GFRNPIFDVM VFKQQASVEF ADSTQKVDIL DIDTNFGCFV 480
  481 NPLFAGEAEA EA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle